Transcript: lnc-AGAP5-1:25

Basic information

LNCipedia transcript ID: lnc-AGAP5-1:25 
LNCipedia gene ID: lnc-AGAP5-1
Location (hg38): chr10:73668644-73730494
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 8533 bp
Exons: 21
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242288.6|MICT00000044057.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 247.2511 coding 
CPAT coding probability 99.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AGAP5-1:25 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AGAP5-1:25
5.0 lnc-AGAP5-1:25
5.1 lnc-VSIR-31:14
5.2 lnc-AGAP5-1:25