Transcript: lnc-AGAP9-39:2

Basic information

LNCipedia transcript ID: lnc-AGAP9-39:2 
LNCipedia gene ID: lnc-AGAP9-39
Location (hg38): chr10:47552699-47553506
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 808 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT013178
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.5542 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGAP9-39:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AGAP10-1:3
4.0 lnc-AGAP10-1:3
4.1 lnc-AGAP10-1:3
5.0 lnc-AGAP10-1:3
5.1 lnc-LRRC18-39:2
5.2 lnc-AGAP9-39:2