Transcript: lnc-AGAP9-4:1

Basic information

LNCipedia transcript ID: lnc-AGAP9-4:1 
LNCipedia gene ID: lnc-AGAP9-4
Location (hg38): chr10:47581211-47582330
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 403 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT139972
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.3474 non-coding 
CPAT coding probability 83.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AGAP9-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AGAP10-4:2
4.0 lnc-AGAP10-4:2
4.1 lnc-AGAP10-4:2
5.0 lnc-AGAP10-4:2
5.1 lnc-LRRC18-38:1
5.2 lnc-AGAP9-4:1