Transcript: lnc-AGO2-2:4

Basic information

LNCipedia transcript ID: lnc-AGO2-2:4 
LNCipedia gene ID: lnc-AGO2-2
Location (hg38): chr8:140505135-140510283
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5149 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1379:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.8609 non-coding 
CPAT coding probability 11.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGO2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-EIF2C2-2:3
4.1 lnc-TRAPPC9-2:5
5.0 lnc-TRAPPC9-2:5
5.1 lnc-SLURP2-37:4
5.2 lnc-AGO2-2:4