Transcript: lnc-AGO3-3:1

Basic information

LNCipedia transcript ID: lnc-AGO3-3:1 
LNCipedia gene ID: lnc-AGO3-3
Location (hg38): chr1:36064178-36072501
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 8324 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA15:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.991 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGO3-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-EIF2C3-3:2
4.1 lnc-EIF2C3-3:2
5.0 lnc-EIF2C3-3:2
5.1 lnc-NCDN-24:1
5.2 lnc-AGO3-3:1