Transcript: lnc-AGRP-1:26

Basic information

LNCipedia transcript ID: lnc-AGRP-1:26 
LNCipedia gene ID: lnc-AGRP-1
Location (hg38): chr16:67523656-67528705
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5050 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259804.1|ENCT00000167596.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.6724 non-coding 
CPAT coding probability 9.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGRP-1:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AGRP-1:26
5.0 lnc-AGRP-1:26
5.1 lnc-PSMB10-10:24
5.2 lnc-AGRP-1:26