Transcript: lnc-AGT-6:2

Basic information

LNCipedia transcript ID: lnc-AGT-6:2 
LNCipedia gene ID: lnc-AGT-6
Location (hg38): chr1:230801465-230807962
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 298 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT010141
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.1546 non-coding 
CPAT coding probability 9.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AGT-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf198-3:5
4.0 lnc-AGT-6:2
4.1 lnc-AGT-6:2
5.0 lnc-AGT-6:2
5.1 lnc-EXOC8-13:2
5.2 lnc-AGT-6:2