Transcript: lnc-AHCY-5:1

Basic information

LNCipedia transcript ID: lnc-AHCY-5:1 
LNCipedia gene ID: lnc-AHCY-5
Location (hg38): chr20:34402149-34402696
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 548 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT079441
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
CVVVGDGAVGK 100% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.5089 non-coding 
CPAT coding probability 22.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AHCY-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AHCY-5:1
4.0 lnc-AHCY-5:1
4.1 lnc-AHCY-5:1
5.0 lnc-AHCY-5:1
5.1 lnc-MMP24OS-18:1
5.2 lnc-AHCY-5:1