Transcript: lnc-AHNAK-1:13

Basic information

LNCipedia transcript ID: lnc-AHNAK-1:13 
LNCipedia gene ID: lnc-AHNAK-1
Location (hg38): chr11:62411178-62411690
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 212 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019652; NONHSAT021748
Alternative gene names: XLOC_009457; linc-SCGB1D4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -176.9421 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AHNAK-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AHNAK-1:1
3.1 lnc-AHNAK-2:1
4.0 lnc-AHNAK-2:1
4.1 lnc-AHNAK-1:13
5.0 lnc-AHNAK-1:13
5.1 lnc-LTBP3-134:13
5.2 lnc-AHNAK-1:13