Transcript: lnc-AHSP-5:10

Basic information

LNCipedia transcript ID: lnc-AHSP-5:10 
LNCipedia gene ID: lnc-AHSP-5
Location (hg38): chr16:31508514-31509529
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 885 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024367; NONHSAT141927
Alternative gene names: XLOC_011691; linc-AHSP


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -483.2277 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AHSP-5:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC5A2-1:2
3.1 lnc-SLC5A2-1:2
4.0 lnc-SLC5A2-1:2
4.1 lnc-AHSP-5:10
5.0 lnc-AHSP-5:10
5.1 lnc-ZNF646-46:10
5.2 lnc-AHSP-5:10