Transcript: lnc-AIDA-1:1

Basic information

LNCipedia transcript ID: lnc-AIDA-1:1 
LNCipedia gene ID: lnc-AIDA-1
Ensembl Gene ID: ENSG00000272750
Ensembl Transcript ID: ENST00000608771
Location (hg38): chr1:222658867-222661512
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2646 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608771.1
Alternative gene names: ENSG00000272750.1; RP11-378J18.8; AL592148.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.1242 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AIDA-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AIDA-1:1
4.0 lnc-AIDA-1:1
4.1 lnc-AIDA-1:1
5.0 lnc-AIDA-1:1
5.1 lnc-LEFTY2-51:1
5.2 lnc-AIDA-1:1