Transcript: lnc-AIDA-2:6

Basic information

LNCipedia transcript ID: lnc-AIDA-2:6 
LNCipedia gene ID: lnc-AIDA-2
Location (hg38): chr1:222760652-222773140
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 679 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000095666.1|MICT00000031147.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -166.6717 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AIDA-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AIDA-2:6
5.0 lnc-AIDA-2:6
5.1 lnc-LEFTY2-48:4
5.2 lnc-AIDA-2:6