Transcript: lnc-AK6-6:7

Basic information

LNCipedia transcript ID: lnc-AK6-6:7 
LNCipedia gene ID: lnc-AK6-6
Location (hg38): chr5:69624383-69640358
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1685 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1122:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.9552 non-coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AK6-6:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TAF9-6:7
4.1 lnc-TAF9-6:7
5.0 lnc-TAF9-6:7
5.1 lnc-TRIM23-62:7
5.2 lnc-AK6-6:7