Transcript: lnc-AKAIN1-2:2

Basic information

LNCipedia transcript ID: lnc-AKAIN1-2:2 
LNCipedia gene ID: lnc-AKAIN1-2
Location (hg38): chr18:5132759-5133172
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 414 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT057051
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.3536 non-coding 
CPAT coding probability 60.63% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AKAIN1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP005380.1-2:2
4.0 lnc-AP005380.1-2:2
4.1 lnc-AP005380.1-2:2
5.0 lnc-AP005380.1-2:2
5.1 lnc-SMAD2-342:2
5.2 lnc-AKAIN1-2:2