Transcript: lnc-AKAP7-1:6

Basic information

LNCipedia transcript ID: lnc-AKAP7-1:6 
LNCipedia gene ID: lnc-AKAP7-1
Location (hg38): chr6:131294421-131344687
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6106 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000085914.1|ENCT00000377896.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.3787 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKAP7-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKAP7-1:6
5.0 lnc-AKAP7-1:6
5.1 lnc-TBPL1-52:5
5.2 lnc-AKAP7-1:6