Transcript: lnc-AKAP8-2:1

Basic information

LNCipedia transcript ID: lnc-AKAP8-2:1 
LNCipedia gene ID: lnc-AKAP8-2
Ensembl Gene ID: ENSG00000273218
Ensembl Transcript ID: ENST00000609708
Location (hg38): chr19:15346068-15348417
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1769 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609708.1
Alternative gene names: ENSG00000273218.1; LLNLR-246C6.1; AC005776.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.9386 non-coding 
CPAT coding probability 1.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKAP8-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKAP8-2:1
4.0 lnc-AKAP8-2:1
4.1 lnc-AKAP8-2:1
5.0 lnc-AKAP8-2:1
5.1 lnc-PALM3-46:1
5.2 lnc-AKAP8-2:1