Transcript: lnc-AKIRIN1-14:1

Basic information

LNCipedia transcript ID: lnc-AKIRIN1-14:1 
LNCipedia gene ID: lnc-AKIRIN1-14
Location (hg38): chr1:38518283-38532755
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 326 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT002517
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -262.4438 non-coding 
CPAT coding probability 4.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKIRIN1-14:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKIRIN1-14:1
4.0 lnc-AKIRIN1-14:1
4.1 lnc-AKIRIN1-14:1
5.0 lnc-AKIRIN1-14:1
5.1 lnc-PPIE-41:1
5.2 lnc-AKIRIN1-14:1