Transcript: lnc-AKR1C2-11:1

Basic information

LNCipedia transcript ID: lnc-AKR1C2-11:1 
LNCipedia gene ID: lnc-AKR1C2-11
Location (hg38): chr10:5154460-5185187
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2363 bp
Exons: 8
Sources: Broad Institute
Alternative transcript names: TCONS_00017683; NR_027916
Alternative gene names: XLOC_008705; linc-AKR1C2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 764.8225 coding 
CPAT coding probability 77.65% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AKR1C2-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AKR1C2-1:1
3.1 lnc-AKR1C2-2:1
4.0 lnc-AKR1C2-2:1
4.1 lnc-AKR1C2-2:1
5.0 lnc-AKR1C2-2:1
5.1 lnc-KLF6-43:1
5.2 lnc-AKR1C2-11:1