Transcript: lnc-AKR1C2-1:1

Basic information

LNCipedia transcript ID: lnc-AKR1C2-1:1 
LNCipedia gene ID: lnc-AKR1C2-1
Location (hg38): chr10:4975782-4976206
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 370 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000435726.1; RP11-69D4.3-001; OTTHUMT00000046522.1; NONHSAT011122
Alternative gene names: ENSG00000224115.1; RP11-69D4.3; OTTHUMG00000017579.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.8418 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1C2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKR1C2-1:1
4.0 lnc-AKR1C2-1:1
4.1 lnc-AKR1C2-1:1
5.0 lnc-AKR1C2-1:1
5.1 lnc-KLF6-38:1
5.2 lnc-AKR1C2-1:1