Transcript: lnc-AKR1C2-2:3

Basic information

LNCipedia transcript ID: lnc-AKR1C2-2:3 
LNCipedia gene ID: lnc-AKR1C2-2
Location (hg38): chr10:5144463-5149958
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1532 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc009xhz_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.1904 non-coding 
CPAT coding probability 66.07% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AKR1C2-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKR1CL1-2:1
4.0 lnc-AKR1CL1-2:1
4.1 lnc-AKR1CL1-2:1
5.0 lnc-AKR1CL1-2:1
5.1 lnc-KLF6-42:1
5.2 lnc-AKR1C2-2:3