Transcript: lnc-AKR1C3-1:1

Basic information

LNCipedia transcript ID: lnc-AKR1C3-1:1 
LNCipedia gene ID: lnc-AKR1C3-1
Location (hg38): chr10:4973366-4975081
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1198 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000509928
Alternative gene names: ENSG00000250883


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.5066 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1C3-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AKR1C3-1:1
3.1 lnc-AKR1C3-1:1
4.0 lnc-AKR1C3-1:1
4.1 lnc-AKR1C3-1:1
5.0 lnc-AKR1C3-1:1
5.1 lnc-NPY4R2-487:1
5.2 lnc-AKR1C3-1:1