Transcript: lnc-AKR1D1-5:2

Basic information

LNCipedia transcript ID: lnc-AKR1D1-5:2 
LNCipedia gene ID: lnc-AKR1D1-5
Location (hg38): chr7:137846896-137860096
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 13201 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000094163.1|HBMT00001325857.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.859 non-coding 
CPAT coding probability 2.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1D1-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKR1D1-5:2
5.0 lnc-AKR1D1-5:2
5.1 lnc-CLEC2L-35:1
5.2 lnc-AKR1D1-5:2