Transcript: lnc-AKR1D1-5:4

Basic information

LNCipedia transcript ID: lnc-AKR1D1-5:4 
LNCipedia gene ID: lnc-AKR1D1-5
Location (hg38): chr7:137846991-137854512
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5120 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000094163.1|MICT00000334120.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -95.4618 non-coding 
CPAT coding probability 4.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1D1-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKR1D1-5:4
5.0 lnc-AKR1D1-5:4
5.1 lnc-CLEC2L-35:3
5.2 lnc-AKR1D1-5:4