Transcript: lnc-AKR1E2-15:1

Basic information

LNCipedia transcript ID: lnc-AKR1E2-15:1 
LNCipedia gene ID: lnc-AKR1E2-15
Location (hg38): chr10:4241998-4256853
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1235 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000103597.1|MICT00000036022.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -63.8047 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1E2-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKR1E2-15:1
5.0 lnc-AKR1E2-15:1
5.1 lnc-NPY4R2-496:1
5.2 lnc-AKR1E2-15:1