Transcript: lnc-AKR1E2-4:1

Basic information

LNCipedia transcript ID: lnc-AKR1E2-4:1 
LNCipedia gene ID: lnc-AKR1E2-4
Location (hg38): chr10:4334410-4337208
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 930 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018093; NONHSAT011088
Alternative gene names: XLOC_008359; linc-AKR1E2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.7648 non-coding 
CPAT coding probability 3.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1E2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AKR1E2-4:1
3.1 lnc-AKR1E2-4:1
4.0 lnc-AKR1E2-4:1
4.1 lnc-AKR1E2-4:1
5.0 lnc-AKR1E2-4:1
5.1 lnc-NPY4R2-494:1
5.2 lnc-AKR1E2-4:1