Transcript: lnc-AKR1E2-5:10

Basic information

LNCipedia transcript ID: lnc-AKR1E2-5:10 
LNCipedia gene ID: lnc-AKR1E2-5
Location (hg38): chr10:4051254-4055277
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 983 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236990.1|MICT00000035975.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.1184 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1E2-5:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AKR1E2-5:10
5.0 lnc-AKR1E2-5:10
5.1 lnc-NPY4R2-500:8
5.2 lnc-AKR1E2-5:10