Transcript: lnc-AKR1E2-9:3

Basic information

LNCipedia transcript ID: lnc-AKR1E2-9:3 
LNCipedia gene ID: lnc-AKR1E2-9
Location (hg38): chr10:4396502-4399251
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 869 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT011093
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.542 non-coding 
CPAT coding probability 4.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1E2-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKR1E2-9:3
4.0 lnc-AKR1E2-9:3
4.1 lnc-AKR1E2-9:3
5.0 lnc-AKR1E2-9:3
5.1 lnc-NPY4R2-492:3
5.2 lnc-AKR1E2-9:3