Transcript: lnc-AKR7A3-1:1

Basic information

LNCipedia transcript ID: lnc-AKR7A3-1:1 
LNCipedia gene ID: lnc-AKR7A3-1
RefSeq ID: NR_037847
Location (hg38): chr1:19293247-19295736
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2490 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT001292; NR_037847; NR_037847.1
Alternative gene names: LOC100506730


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.1817 non-coding 
CPAT coding probability 8.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR7A3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKR7A3-1:1
4.0 lnc-AKR7A3-1:1
4.1 lnc-AKR7A3-1:1
5.0 lnc-AKR7A3-1:1
5.1 lnc-CAMK2N1-18:2
5.2 lnc-AKR7A3-1:1