Transcript: lnc-AKT1-1:1

Basic information

LNCipedia transcript ID: lnc-AKT1-1:1 
LNCipedia gene ID: lnc-AKT1-1
Location (hg38): chr14:104857792-104859281
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1225 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000553344.1; CTD-3051D23.4-001; OTTHUMT00000410287.1; NONHSAT040290
Alternative gene names: ENSG00000258593.1; CTD-3051D23.4; OTTHUMG00000170762.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.0357 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKT1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKT1-1:1
4.0 lnc-AKT1-1:1
4.1 lnc-AKT1-1:1
5.0 lnc-AKT1-1:1
5.1 lnc-AKT1-1:1
5.2 lnc-AKT1-1:1