Transcript: lnc-AKT1-99:1

Basic information

LNCipedia transcript ID: lnc-AKT1-99:1 
LNCipedia gene ID: lnc-AKT1-99
Ensembl Gene ID: ENSG00000259037
Ensembl Transcript ID: ENST00000556073
Location (hg38): chr14:104589021-104589847
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 543 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556073.1; RP11-614O9.1-001; OTTHUMT00000410583.1; NONHSAT040261
Alternative gene names: ENSG00000259037.1; RP11-614O9.1; OTTHUMG00000170828.1; BX927359.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.7635 non-coding 
CPAT coding probability 11.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKT1-99:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM179-1:1
4.0 lnc-TMEM179-1:1
4.1 lnc-TMEM179-1:1
5.0 lnc-TMEM179-1:1
5.1 lnc-AKT1-11:1
5.2 lnc-AKT1-99:1