Transcript: lnc-AKTIP-4:1

Basic information

LNCipedia transcript ID: lnc-AKTIP-4:1 
LNCipedia gene ID: lnc-AKTIP-4
Location (hg38): chr16:53476387-53486297
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 643 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002ehu_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.8591 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKTIP-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKTIP-4:1
4.0 lnc-AKTIP-4:1
4.1 lnc-AKTIP-4:1
5.0 lnc-AKTIP-4:1
5.1 lnc-CFAP20-101:1
5.2 lnc-AKTIP-4:1