Transcript: lnc-ALCAM-8:11

Basic information

LNCipedia transcript ID: lnc-ALCAM-8:11 
LNCipedia gene ID: lnc-ALCAM-8
Location (hg38): chr3:106176951-106177590
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 640 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000061185.1|FTMT21200005273.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -97.0066 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALCAM-8:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALCAM-8:11
5.0 lnc-ALCAM-8:11
5.1 lnc-TMEM45A-52:10
5.2 lnc-ALCAM-8:11