Transcript: lnc-ALDH1A2-9:5

Basic information

LNCipedia transcript ID: lnc-ALDH1A2-9:5 
LNCipedia gene ID: lnc-ALDH1A2-9
Location (hg38): chr15:58013986-58279321
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 542 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT044088
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.9347 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH1A2-9:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM10-9:5
4.0 lnc-ALDH1A2-9:5
4.1 lnc-ALDH1A2-9:5
5.0 lnc-ALDH1A2-9:5
5.1 lnc-ICE2-62:5
5.2 lnc-ALDH1A2-9:5