Transcript: lnc-ALDH1A2-9:6

Basic information

LNCipedia transcript ID: lnc-ALDH1A2-9:6 
LNCipedia gene ID: lnc-ALDH1A2-9
Location (hg38): chr15:58014261-58279280
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 562 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT044089
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.2798 non-coding 
CPAT coding probability 10.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH1A2-9:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM10-9:6
4.0 lnc-ALDH1A2-9:6
4.1 lnc-ALDH1A2-9:6
5.0 lnc-ALDH1A2-9:6
5.1 lnc-ICE2-62:6
5.2 lnc-ALDH1A2-9:6