Transcript: lnc-ALDH1A3-1:14

Basic information

LNCipedia transcript ID: lnc-ALDH1A3-1:14 
LNCipedia gene ID: lnc-ALDH1A3-1
Location (hg38): chr15:100861571-100862171
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 601 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT051134; ENST00000593314.1
Alternative gene names: ENSG00000232386.5; RP11-66B24.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -480.9375 non-coding 
CPAT coding probability 53.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ALDH1A3-1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALDH1A3-1:14
4.0 lnc-ALDH1A3-1:14
4.1 lnc-ALDH1A3-1:14
5.0 lnc-ALDH1A3-1:14
5.1 lnc-OR4F15-14:15
5.2 lnc-ALDH1A3-1:14