Transcript: lnc-ALDH1A3-1:16

Basic information

LNCipedia transcript ID: lnc-ALDH1A3-1:16 
LNCipedia gene ID: lnc-ALDH1A3-1
Location (hg38): chr15:100849747-100850092
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 211 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA455:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 10.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH1A3-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ALDH1A3-1:16
4.1 lnc-ALDH1A3-1:16
5.0 lnc-ALDH1A3-1:16
5.1 lnc-OR4F15-14:2
5.2 lnc-ALDH1A3-1:16