Transcript: lnc-ALDH1B1-13:5

Basic information

LNCipedia transcript ID: lnc-ALDH1B1-13:5 
LNCipedia gene ID: lnc-ALDH1B1-13
Location (hg38): chr9:38650199-38661260
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2750 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015976; NONHSAT131188
Alternative gene names: XLOC_007352; linc-FAM75A1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.5993 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH1B1-13:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM201A-1:1
3.1 lnc-FAM201A-1:1
4.0 lnc-FAM201A-1:1
4.1 lnc-FAM201A-1:1
5.0 lnc-FAM201A-1:1
5.1 lnc-DCAF10-13:5
5.2 lnc-ALDH1B1-13:5