Transcript: lnc-ALDH1B1-9:2

Basic information

LNCipedia transcript ID: lnc-ALDH1B1-9:2 
LNCipedia gene ID: lnc-ALDH1B1-9
Location (hg38): chr9:38804007-38851916
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 891 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT131195; ENST00000444791.2
Alternative gene names: ENSG00000228467.2; RP11-402N8.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.316 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH1B1-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM201A-2:2
4.0 lnc-FAM201A-2:2
4.1 lnc-FAM201A-2:2
5.0 lnc-FAM201A-2:2
5.1 lnc-DCAF10-15:2
5.2 lnc-ALDH1B1-9:2