Transcript: lnc-ALDH2-1:2

Basic information

LNCipedia transcript ID: lnc-ALDH2-1:2 
LNCipedia gene ID: lnc-ALDH2-1
Location (hg38): chr12:111897336-111897906
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 571 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT030772; ENST00000602695.1
Alternative gene names: ENSG00000270018.1; RP3-462E2.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.5065 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAPKAPK5-1:1
4.0 lnc-MAPKAPK5-1:1
4.1 lnc-MAPKAPK5-1:1
5.0 lnc-MAPKAPK5-1:1
5.1 lnc-ERP29-7:1
5.2 lnc-ALDH2-1:2