Transcript: lnc-ALDH3B1-2:1

Basic information

LNCipedia transcript ID: lnc-ALDH3B1-2:1 
LNCipedia gene ID: lnc-ALDH3B1-2
Location (hg38): chr11:67878096-67887088
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1834 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_505_chr11:67645566-67653308_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.3169 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH3B1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDUFS8-2:7
4.0 lnc-NDUFS8-2:7
4.1 lnc-NDUFS8-2:7
5.0 lnc-NDUFS8-2:7
5.1 lnc-NDUFS8-2:7
5.2 lnc-ALDH3B1-2:1