Transcript: lnc-ALDH3B1-2:2

Basic information

LNCipedia transcript ID: lnc-ALDH3B1-2:2 
LNCipedia gene ID: lnc-ALDH3B1-2
Location (hg38): chr11:67886446-67887502
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 286 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019351; NONHSAT022476
Alternative gene names: XLOC_009181; linc-ALDH3B1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.0206 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH3B1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NDUFS8-1:1
3.1 lnc-NDUFS8-2:1
4.0 lnc-NDUFS8-2:1
4.1 lnc-NDUFS8-2:1
5.0 lnc-NDUFS8-2:1
5.1 lnc-NDUFS8-2:1
5.2 lnc-ALDH3B1-2:2