Transcript: lnc-ALDH3B1-2:6

Basic information

LNCipedia transcript ID: lnc-ALDH3B1-2:6 
LNCipedia gene ID: lnc-ALDH3B1-2
Location (hg38): chr11:67886530-67894090
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 544 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00019352
Alternative gene names: XLOC_009181; linc-ALDH3B1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 31.7375 non-coding 
CPAT coding probability 14.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH3B1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NDUFS8-1:4
3.1 lnc-NDUFS8-2:4
4.0 lnc-NDUFS8-2:4
4.1 lnc-NDUFS8-2:4
5.0 lnc-NDUFS8-2:4
5.1 lnc-NDUFS8-2:4
5.2 lnc-ALDH3B1-2:6