Transcript: lnc-ALDH9A1-3:2

Basic information

LNCipedia transcript ID: lnc-ALDH9A1-3:2 
LNCipedia gene ID: lnc-ALDH9A1-3
Location (hg38): chr1:165628402-165630786
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1443 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081511.1|MICT00000024308.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.7008 non-coding 
CPAT coding probability 4.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALDH9A1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ALDH9A1-3:2
5.0 lnc-ALDH9A1-3:2
5.1 lnc-SH2D1B-44:2
5.2 lnc-ALDH9A1-3:2