Transcript: lnc-ALG1-4:1

Basic information

LNCipedia transcript ID: lnc-ALG1-4:1 
LNCipedia gene ID: lnc-ALG1-4
Location (hg38): chr16:4959761-4961120
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1202 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1272_chr16:5009761-5011121_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.618 non-coding 
CPAT coding probability 7.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG1-4:1
4.0 lnc-ALG1-4:1
4.1 lnc-ALG1-4:1
5.0 lnc-ALG1-4:1
5.1 lnc-SMIM22-6:1
5.2 lnc-ALG1-4:1