Transcript: lnc-ALG1-5:2

Basic information

LNCipedia transcript ID: lnc-ALG1-5:2 
LNCipedia gene ID: lnc-ALG1-5
Location (hg38): chr16:6573928-6577328
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 670 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT140360
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.4067 non-coding 
CPAT coding probability 5.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG1-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-124K4.2.1-3:2
4.0 lnc-RP11-124K4.2.1-3:2
4.1 lnc-RP11-124K4.2.1-3:2
5.0 lnc-RP11-124K4.2.1-3:2
5.1 lnc-SMIM22-27:2
5.2 lnc-ALG1-5:2