Transcript: lnc-ALG14-5:1

Basic information

LNCipedia transcript ID: lnc-ALG14-5:1 
LNCipedia gene ID: lnc-ALG14-5
Location (hg38): chr1:95356019-95381000
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1013 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000426881; ENST00000426881.1; RP11-14O19.2-001; OTTHUMT00000030084.1
Alternative gene names: ENSG00000237954; RP11-14O19.2; ENSG00000237954.2; OTTHUMG00000010913.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.7706 non-coding 
CPAT coding probability 10.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG14-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ALG14-3:2
3.1 lnc-ALG14-5:1
4.0 lnc-ALG14-5:1
4.1 lnc-ALG14-5:1
5.0 lnc-ALG14-5:1
5.1 lnc-CNN3-14:2
5.2 lnc-ALG14-5:1