Transcript: lnc-ALG14-5:2

Basic information

LNCipedia transcript ID: lnc-ALG14-5:2 
LNCipedia gene ID: lnc-ALG14-5
Location (hg38): chr1:95355389-95381000
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1643 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000092; NONHSAT004670
Alternative gene names: XLOC_000929; linc-ALG14-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.884 non-coding 
CPAT coding probability 10.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG14-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ALG14-3:1
3.1 lnc-ALG14-5:2
4.0 lnc-ALG14-5:2
4.1 lnc-ALG14-5:2
5.0 lnc-ALG14-5:2
5.1 lnc-CNN3-14:1
5.2 lnc-ALG14-5:2