Transcript: lnc-ALG14-5:3

Basic information

LNCipedia transcript ID: lnc-ALG14-5:3 
LNCipedia gene ID: lnc-ALG14-5
Location (hg38): chr1:95355389-95380972
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1691 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000427695.2; RP11-14O19.2-002; OTTHUMT00000030085.2; NONHSAT004669
Alternative gene names: ENSG00000237954.2; RP11-14O19.2; OTTHUMG00000010913.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.884 non-coding 
CPAT coding probability 10.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG14-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG14-5:3
4.0 lnc-ALG14-5:3
4.1 lnc-ALG14-5:3
5.0 lnc-ALG14-5:3
5.1 lnc-CNN3-14:5
5.2 lnc-ALG14-5:3