Transcript: lnc-ALG1L2-5:1

Basic information

LNCipedia transcript ID: lnc-ALG1L2-5:1 
LNCipedia gene ID: lnc-ALG1L2-5
Location (hg38): chr3:130199708-130199918
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 211 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT092107
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.0374 non-coding 
CPAT coding probability 27.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG1L2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COL6A5-5:1
4.0 lnc-COL6A5-5:1
4.1 lnc-COL6A5-5:1
5.0 lnc-COL6A5-5:1
5.1 lnc-ATP2C1-16:1
5.2 lnc-ALG1L2-5:1