Transcript: lnc-ALKBH7-2:1

Basic information

LNCipedia transcript ID: lnc-ALKBH7-2:1 
LNCipedia gene ID: lnc-ALKBH7-2
Location (hg38): chr19:6396345-6412404
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 530 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000596254.1
Alternative gene names: ENSG00000214347.5; CTB-180A7.8; ENSG00000214347.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 834.7441 coding 
CPAT coding probability 97.14% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ALKBH7-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALKBH7-2:1
4.0 lnc-ALKBH7-2:1
4.1 lnc-ALKBH7-2:1
5.0 lnc-ALKBH7-2:1
5.1 lnc-TRIP10-11:1
5.2 lnc-ALKBH7-2:1